Showing posts with label linkage. Show all posts
Showing posts with label linkage. Show all posts

Tuesday, 24 December 2013

Influence of the rostrum linkage system on forage volume in Brontorusps (Brontocrambis brucus)


A Christmas Special!
Ahead of the normal schedule, and with dinosaurs, rusps and biomechanics!

Click to enlarge; copyright Gert van Dijk
The title of this post sounds like that of a proper scientific paper, doesn't it? Something out of the 'Journal of Astrobiological Biomechanics', I guess. It's time to look at rusps again. My big rusp painting is finished, and as it is meant as a double-page spread, it is large: 7200 by 2700 pixels. A spoiler is shown above showing a fragment of a rusp in the background of the painting. The fragment has been halved in size and its area represents just 2% of that of the entire painting. The painting is based on earlier sketches. For more on rusps, either visit the main Furaha site or look at these posts: sketches, anatomy, predation, concept paintings, etc.  

The evolution of new Furahan animals gets more complicated with time. In the beginning I just sketched a pleasing shape and started painting right away. Now, I worry more whether the animal makes evolutionary, mechanical and ecological sense. Well, up to a point; this is science fiction and supposed to be fun, after all. 

Here are some of the steps in rusp 'ontology': they started with some quick sketches, and then the slow evolution began: successive legs were offset medially and laterally to avoid legs bumping into one another, followed by an arrangement for their skeleton. Their fore and aft whips are long and held horizontally rather like the tails and necks of sauropods, and hence have a similar system of internal trusses as compressive elements at the bottom and ligaments at the top to withstand tensile stress. The whip is held up passively by these forces, so avoiding the high cost of doing that with muscle force only. The last stage involved refining the head of the rusp, and in particular its snout, or 'rostrum'. In an earlier post this rusp species was called Mammoth Rusp / Megacrambis, but now it is the Brontorusp / Brontocrambis; yes, that means 'Thunder Caterpillar'!  The Mammoth Rusp still had some intricate limbs functioning as additional feeding aids under its snout. I was not too certain of that arrangement, and my doubts were confirmed by comments on that post. So the Brontorusp no longer has these additional mouth parts. The thing is, now we have a massive animal with a large head. How does it feed itself?

The mouth of the rusp is in its head, which seems obvious but in speculative biology not many things are obvious. Also note that rusps are large herbivores: they need a lot of food and spend much of their time eating. Moving about is costly, so it would be best if they moved the least possible amount to get their food, which does not sound as if there is much room to save energy. Let's tackle that by considering the problem of getting an animal's mouth on vegetation; there appear to be four solutions to do so; rusps use the fourth, but we'll come to that. The first solution, always necessary as vegetation will not come to you, involves walking to the food source.

Click to enlarge; copyright Klein et al; Biology of the sauropod dinosaurs. Indiana University Press 2011
But once an animal arrives at its 'foraging station' a nice way to save energy is to keep most of the body motionless and to have a long neck allowing the head and mouth to move about independently of the gut. For very large animals, needing to feed all day, it pays to divide their anatomy in mouth and guts; the rest is just 'other bits'. Sauropod dinosaurs used that method, and the image above is from a study on how far sauropod mouths could reach, depending on neck length and leg length. The idea is that the neck can move in a horizontal plane 90 degrees to the right and the left, and in a vertical plane straight up and down. If the animal is lying on the ground the volume of space that it can reach is one quarter of a sphere. If the base of the neck is higher up, when the animal is standing, the volume increases. The authors assume that the bottom part of the volume then is cylindrical whereas I would assume that to be spherical as well, but never mind.

Click to enlarge; copyright Gert van Dijk
Swans and geese have very flexible necks and can probably reach every point within that envelope, but if an animal has a neck less flexible than a swan's, only part of the volume is accessible to the mouth. If this is the first time you realised that geese and sauropods might have long necks for a similar reason, good!

The image above shows an adapted 'forage volume' for a sauropod: the outer red sphere is the outer limit of where it can reach, and the inner blue sphere represents the inner limit, assuming that the neck is too stiff for the animal to reach a point closer to its body. The human ('Marlene') is just there to keep the sauropod in its proper place. 

The third solution to get the mouth near food is to use an appendage to shovel food towards the mouth. The best example I can think of is the elephant's trunk, which greatly increases the elephant's reach. The erstwhile rusp mouth limbs were short and not at all good as harvester limbs, and I did not wish to elongate them tenfold; they are gone. I also did not wish to turn the whip into a grasping organ. Rusp whips are not built for that, although in a pickle they can probably be used to knock a branch off a tree. Instead, rusps use a fourth system which is really just a combination of the last two: they carry their mouths towards the food without moving the rest of the head. The 'mouth extender' is extensible and based on a mechanical linkage system. In itself this is certainly not a new idea: Earth fish have such systems in abundance.

Click to enlarge; copyright Gert van Dijk
This image shows a schematic view of the rusp rostrum. Start with the red shape in the foreground: it consists of two V-shapes starting from a vertical axis. All places where elements meet are in fact joints. The pink axis shows that the whole ensemble can rotate, but it can do other things as well: if the two Vs rotate towards one another, the whole shape will become longer and narrower. At its right end, the shape ends in two points on a horizontal line. Now copy the shape, rotate it by 90 degrees, and you get the blue shape in the foreground. The two points where the red shape ends act as connection points for the blue shape. Once connected, some movements from the red shape are connected to the blue one, but not all, and that makes the rusp rostrum quite versatile. In the back you see how the rostrum is formed by stringing red and blue shapes together. In reality the trusses are not formed by straight bones, but by curved ones, so the section of the rostrum is circular rather than rhombic. The cylinder on the right attempts to show the outlines of the bones on a cylinder.


Click to enlarge; copyright Gert van Dijk
And this image shows an as yet unmentioned aspect of movement: if the two starting points are brought closer together, this changes the section of the rostrum as well as its length. The right one is extended, the middle one shortened, and the right one is in neutral position. I expect rusp rostra (yes, that's the plural) to be able to double in length.

Click to enlarge; copyright Gert van Dijk
But we need more flexibility, and that is achieved by rotating the shapes and using the angle between the Vs for additional control. The stylised skeleton in the back shows what can be achieved. So there we are: an extensible and steerable system to get rusp mouths where they would otherwise not reach.


Click to enlarge; copyright Gert van Dijk
Here are two views of an adapted Sculptris model of a rusp head. I take it you will recognise the system of trusses under its hide.

Click to enlarge; copyright Gert van Dijk
And finally, a schematic rusp foraging volume, rather like that of the sauropod (the whip of this model is truncated). Note that the rusp can access a larger portion of the outer foraging volume than the sauropod. The volume itself is smaller though, as rusps are smaller than sauropods, and their rostra extend their reach, bot nearly as much as the sauropod's neck does. Marlene is standing in the forage volume, something I would definitely NOT recommend! In practice, rusps are ground feeders, not bothering about high branches. Have I told you about the ecology of the spotted plains where they live, where post of forests alternate with plains and how rusp feeding habits are to blame for that? No? Oh well, that is another story.  

Wednesday, 18 August 2010

Strandbeesten and mantis shrimps

Actually, 'Strandbeesten and stomatopods' might have sounded better, but would be even more incomprehensible, and a blog is supposed to attract readers, not frighten them away. Based on how many readers were attracted by previous posts, I should probably use 'The Future is Wild' and particularly 'Avatar' a lot more often in post titles (and no, Furaha was NOT modelled on Avatar; it is much older). Right; now that I've got that out of the way, back to the strandbeesten.

I discussed Theo Jansen's imaginative mechanical walking machines before on this blog. Literally the word is Dutch for 'beach beasts'. If you do not know about them, read that entry and visit Mr Jansen's site, or just enter 'Theo Jansen' into Google or YouTube. His work came up in this blog because of my interest in animal locomotion. The problem he faced was how you can get a foot to move backwards along a straight line when on the ground, after which it has to be lifted, moved forward and put down again for the next step. For real animals this is not a big problem, as the various segments of a limb are all controlled by a nervous system telling each segment when to do what. As Jansen's devices lack a brain, he needed a purely mechanical system to achieve this sort of motion. In the end he came up with an intricate series of interconnected bars: if you start with a rotary motion of one bar, another bar, ending in a foot, produces a suitable movement. Very clever indeed. Such series of connected bars are called linkages. You can take a good look at his design on this particular site, which shows other linkages as well. When I wrote that post I had never seen a single strandbeest yet, and that has now been rectified. Mr Jansen works not that far from where I live, so it was a matter of time before I could visit one of his demonstrations nearby. This was the case last June, on a very cold and windy day. I will show a few videos I made that day.



This is a tiny strandbeest, of which there were three. If its sail is perpendicular to the wind direction, the little beast may walk with the wind. I tried pushing it forward as well, and found that it is not in fact that easy to move. While the 'beesten' are quite light, their joints were harder to move than I had expected. There is no lubrication, but the main problem seems to be that the entire shape deforms enough to put shearing forces on the joints. One result of this is that the poor beest tends to topple over. But never mind that, they are an amazing sight.



Here is a larger one following one of Mr Jansen's assistants.




And this is the major species present at the occasion. Not only did it have two bodies or trunks, an enormous number of legs, but also two waving membranes at the top that I think were designed to help propel it. These sails were reefed that day however, and the force of the wind on the body was enough to prod the beast onwards. Aren't they wonderful?

In my previous post I wondered how often linkages occurred in biology, but did not look up the matter. I have done a bit of research now, and found that there are quite a few examples. Fish jaws are probably the best-known example (see below). Other structures, such as sheep hocks and human knees are also counted as so-called four-bar linkages. In a four-bar linkage four stiff bars are linked together in a sort of circle by pivots. If you hold one bar still, and move another one, the remaining two must move in a fixed way. What that way is depends on how exactly they are connected. I felt that regarding the human knee as a four-bar linkage is bending the rules a bit, as two of the bars are ligaments rather than stiff bars. If you include connected series of bones as well as ligaments there are lots of linkages in biology; what I was looking for was linkages of bones involved in locomotion, but I have not yet seen any. Presumably a system with more mechanical freedom but with a smart nervous system to control it is simply superior. Still, the other ones are interesting.

Click to enlarge; Wainwright et al, Integr Comp Biol 2005; 45: 256-262

Here is an example of what fishes do with a four-bar linkage. The source is mentioned in the caption, and the colours are my addition. Fish use this kind of mechanism to move their jaws forward and to enlarge the volume in their mouths, sucking in water as well as their prey. There is at least one Furahan animal with a similar arrangement, and those are 'Fishes' too. The jaws of the sawjaw are connected, all four of them, by bars linking them to the neurocranium in a kind of circular linkage.

So where are the mantis shrimps, everyone's favourite Terran alien? When searching for linkage mechanisms I found that there is a four-bar mechanism in their 'raptorial appendages' as well! I like that: somehow you expect animals that not just spear or club their prey but can see depth with just one eye to be special in other respects as well, and mantis shrimps never seem to let us down when it comes to, well, weirdness.

Click to enlarge; Patek et al; Nature 2004; 428: 819

Here is a figure from the journal Nature, no less. The first author, Sheila Patek, has a lab where she studies all kinds of biomechanically interesting things, most notably mantis shrimps. Have a look, as there are quite a few videos and photographs. Under 'multimedia' you will find an inspired lecture she gave on 'TED', where she explains the striking mechanism of stomatopod raptorial appendages. Very interesting. She is not the only one interested in stomatopods either; here is another enthusiast.

So now you know why strandbeesten and stomatopods end up in the same post: they are connected by linkage (I could not resist that one). I guess both also score very highly when it comes to their ability to evoke a sense of wonder.



PS. This is post #100!